Installation Instructions¶
Requirements¶
- Python 2.x, 2.7 or superior
- NumPy 1.6 or superior
- nibabel 1.3.x
- If you want to be able to use VTK files to represent tractographies (like for interacting with slicer): VTK 5.x installed along with its python wrappings
All of these can be easily obtained from pre-packaged distributions such as Canopy or Anaconda. In these cases, the packages corresponding to VTK and nibabel will need to be added.
Installation¶
Once these requirements are met, the installation is as follows:
Downloading the source code from git:
git clone http://github.com/demianw/tract_querier.git
Installing:
cd tract_querier
python setup.py install
Now you can check if the installation worked:
tract_querier --help